Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.93□□□□□ -0.5
VGLL1Q99990 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 OR2I1P-209ENST00000641730 5365 ntBASIC11.93□□□□□ -0.5
VGLL1Q99990 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
VGLL1Q99990 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 AC126365.1-201ENST00000578585 1514 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 AL136982.4-201ENST00000437689 1740 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.92□□□□□ -0.5
VGLL1Q99990 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 RNA5SP410-201ENST00000516285 106 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 AC112191.1-201ENST00000523689 701 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
VGLL1Q99990 PDPK2P-202ENST00000562415 1191 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.92□□□□□ -0.5
VGLL1Q99990 AC145285.3-201ENST00000564603 959 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.92□□□□□ -0.5
VGLL1Q99990 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.92□□□□□ -0.5
VGLL1Q99990 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 AL513190.1-201ENST00000621254 727 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
VGLL1Q99990 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
VGLL1Q99990 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 AC139749.1-202ENST00000617529 3139 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 AC148477.4-201ENST00000613430 1793 ntBASIC11.92□□□□□ -0.5
VGLL1Q99990 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.92□□□□□ -0.5
VGLL1Q99990 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VGLL1Q99990 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.92□□□□□ -0.5
VGLL1Q99990 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.91□□□□□ -0.5
VGLL1Q99990 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VGLL1Q99990 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VGLL1Q99990 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 AC023908.3-201ENST00000564211 3047 ntBASIC11.91□□□□□ -0.5
VGLL1Q99990 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VGLL1Q99990 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms