Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV9Q99603 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV9Q99603 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV9Q99603 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
TRGV9Q99603 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV9Q99603 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 AC084364.1-201ENST00000551967 1556 ntBASIC12.22□□□□□ -0.45
TRGV9Q99603 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
TRGV9Q99603 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 AL365209.1-201ENST00000624418 6473 ntBASIC12.22□□□□□ -0.45
TRGV9Q99603 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TRGV9Q99603 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRGV9Q99603 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TRGV9Q99603 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRGV9Q99603 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TRGV9Q99603 YBX2P1-201ENST00000394192 760 ntBASIC12.22□□□□□ -0.45
TRGV9Q99603 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.22□□□□□ -0.45
TRGV9Q99603 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.22□□□□□ -0.45
TRGV9Q99603 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRGV9Q99603 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TRGV9Q99603 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
TRGV9Q99603 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
TRGV9Q99603 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TRGV9Q99603 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV9Q99603 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV9Q99603 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV9Q99603 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.21□□□□□ -0.45
TRGV9Q99603 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
TRGV9Q99603 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRGV9Q99603 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV9Q99603 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRGV9Q99603 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
TRGV9Q99603 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV9Q99603 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRGV9Q99603 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRGV9Q99603 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
TRGV9Q99603 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 AC023274.1-201ENST00000418278 595 ntBASIC12.21□□□□□ -0.45
TRGV9Q99603 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV9Q99603 MCCD1P2-201ENST00000423228 335 ntBASIC12.21□□□□□ -0.45
TRGV9Q99603 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.21□□□□□ -0.45
TRGV9Q99603 AL592309.1-201ENST00000443127 649 ntBASIC12.21□□□□□ -0.45
TRGV9Q99603 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.21□□□□□ -0.45
TRGV9Q99603 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.21□□□□□ -0.45
TRGV9Q99603 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.21□□□□□ -0.45
TRGV9Q99603 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.21□□□□□ -0.45
TRGV9Q99603 SLC25A1P1-201ENST00000528351 927 ntBASIC12.21□□□□□ -0.45
TRGV9Q99603 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms