Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 AC006058.4-201ENST00000624016 1670 ntBASIC18.5■□□□□ 0.55
NEK1Q96PY6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 AL121723.1-201ENST00000445194 1519 ntBASIC18.49■□□□□ 0.55
NEK1Q96PY6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 AL035633.1-201ENST00000406139 838 ntBASIC18.49■□□□□ 0.55
NEK1Q96PY6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 SPCS2P1-201ENST00000561636 679 ntBASIC18.49■□□□□ 0.55
NEK1Q96PY6 AC092337.1-201ENST00000568699 1129 ntBASIC18.49■□□□□ 0.55
NEK1Q96PY6 AC005498.2-205ENST00000593218 784 ntBASIC18.49■□□□□ 0.55
NEK1Q96PY6 AC008738.7-201ENST00000609744 511 ntBASIC18.49■□□□□ 0.55
NEK1Q96PY6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.49■□□□□ 0.55
NEK1Q96PY6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEK1Q96PY6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 AC022144.1-201ENST00000602255 1580 ntBASIC18.48■□□□□ 0.55
NEK1Q96PY6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.48■□□□□ 0.55
NEK1Q96PY6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 TIMM17BP1-201ENST00000545713 516 ntBASIC18.48■□□□□ 0.55
NEK1Q96PY6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 AC004840.1-201ENST00000636359 365 ntBASIC18.48■□□□□ 0.55
NEK1Q96PY6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 CICP11-201ENST00000434745 2827 ntBASIC18.48■□□□□ 0.55
NEK1Q96PY6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.48■□□□□ 0.55
NEK1Q96PY6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NEK1Q96PY6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 AC103702.1-201ENST00000548801 2630 ntBASIC18.47■□□□□ 0.55
NEK1Q96PY6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 KRT18P43-201ENST00000469825 1281 ntBASIC18.47■□□□□ 0.55
NEK1Q96PY6 SPDYE18-201ENST00000510091 1050 ntBASIC18.47■□□□□ 0.55
NEK1Q96PY6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms