Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 SLC22A20-204ENST00000530038 1673 ntBASIC11.92□□□□□ -0.5
AP1S3Q96PC3 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 PMS2P1-201ENST00000431037 1228 ntBASIC11.92□□□□□ -0.5
AP1S3Q96PC3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 KRT16P4-201ENST00000453883 522 ntBASIC11.92□□□□□ -0.5
AP1S3Q96PC3 AC106795.1-205ENST00000512851 1056 ntBASIC11.92□□□□□ -0.5
AP1S3Q96PC3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 AL592424.1-201ENST00000563624 1536 ntBASIC11.91□□□□□ -0.5
AP1S3Q96PC3 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 U82695.1-201ENST00000635752 1889 ntBASIC11.91□□□□□ -0.5
AP1S3Q96PC3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 AC138894.3-201ENST00000603787 634 ntBASIC11.91□□□□□ -0.5
AP1S3Q96PC3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 PGM5P2-202ENST00000637225 1043 ntBASIC11.91□□□□□ -0.5
AP1S3Q96PC3 AL805961.1-202ENST00000641562 540 ntBASIC11.91□□□□□ -0.5
AP1S3Q96PC3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.91□□□□□ -0.5
AP1S3Q96PC3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP1S3Q96PC3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
AP1S3Q96PC3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms