Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 COX5BP1-201ENST00000507622 393 ntBASIC16.47■□□□□ 0.23
CASD1Q96PB1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 ACTG1P17-201ENST00000558391 1119 ntBASIC16.47■□□□□ 0.23
CASD1Q96PB1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 AC138028.6-201ENST00000616106 1482 ntBASIC16.47■□□□□ 0.23
CASD1Q96PB1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
CASD1Q96PB1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASD1Q96PB1 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.46■□□□□ 0.23
CASD1Q96PB1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 FNTAP2-201ENST00000430308 634 ntBASIC16.46■□□□□ 0.23
CASD1Q96PB1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 POM121L10P-201ENST00000436994 1285 ntBASIC16.46■□□□□ 0.23
CASD1Q96PB1 BX284668.4-201ENST00000453917 508 ntBASIC16.46■□□□□ 0.23
CASD1Q96PB1 IGHJ2P-201ENST00000454480 60 ntBASIC16.46■□□□□ 0.23
CASD1Q96PB1 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 SCARNA20.5-201ENST00000516991 142 ntBASIC16.46■□□□□ 0.23
CASD1Q96PB1 AC022616.1-201ENST00000518688 554 ntBASIC16.46■□□□□ 0.23
CASD1Q96PB1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.46■□□□□ 0.23
CASD1Q96PB1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASD1Q96PB1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CASD1Q96PB1 CYP2T1P-202ENST00000641596 2535 ntBASIC16.46■□□□□ 0.22
CASD1Q96PB1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CASD1Q96PB1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASD1Q96PB1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASD1Q96PB1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASD1Q96PB1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CASD1Q96PB1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.45■□□□□ 0.22
CASD1Q96PB1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.45■□□□□ 0.22
CASD1Q96PB1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.45■□□□□ 0.22
CASD1Q96PB1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CASD1Q96PB1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CASD1Q96PB1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CASD1Q96PB1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASD1Q96PB1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASD1Q96PB1 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms