Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 REXO1L1P-202ENST00000608646 1974 ntBASIC14.84□□□□□ -0.03
COL21A1Q96P44 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 MTND6P24-201ENST00000440466 518 ntBASIC14.84□□□□□ -0.03
COL21A1Q96P44 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 KLF2P3-201ENST00000451977 1087 ntBASIC14.84□□□□□ -0.03
COL21A1Q96P44 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 RN7SL828P-201ENST00000607615 303 ntBASIC14.84□□□□□ -0.03
COL21A1Q96P44 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
COL21A1Q96P44 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
COL21A1Q96P44 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.83□□□□□ -0.03
COL21A1Q96P44 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 AC004987.2-201ENST00000395959 1148 ntBASIC14.83□□□□□ -0.04
COL21A1Q96P44 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.83□□□□□ -0.04
COL21A1Q96P44 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.83□□□□□ -0.04
COL21A1Q96P44 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 BANF1P1-201ENST00000553684 263 ntBASIC14.83□□□□□ -0.04
COL21A1Q96P44 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 AC051619.7-201ENST00000568314 623 ntBASIC14.83□□□□□ -0.04
COL21A1Q96P44 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
COL21A1Q96P44 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.83□□□□□ -0.04
COL21A1Q96P44 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms