Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 AC022144.1-201ENST00000602255 1580 ntBASIC16.18■□□□□ 0.18
IFT43Q96FT9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 BANF1P1-201ENST00000553684 263 ntBASIC16.18■□□□□ 0.18
IFT43Q96FT9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 AC027307.3-201ENST00000594262 1100 ntBASIC16.18■□□□□ 0.18
IFT43Q96FT9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 AL358472.5-202ENST00000641448 1267 ntBASIC16.18■□□□□ 0.18
IFT43Q96FT9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 AC007326.2-201ENST00000624224 7579 ntBASIC16.18■□□□□ 0.18
IFT43Q96FT9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT43Q96FT9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT43Q96FT9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 MRPS18AP1-201ENST00000414458 589 ntBASIC16.17■□□□□ 0.18
IFT43Q96FT9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 CETN4P-206ENST00000642099 2168 ntBASIC16.17■□□□□ 0.18
IFT43Q96FT9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IFT43Q96FT9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT43Q96FT9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms