Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CDCA5Q96FF9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDCA5Q96FF9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDCA5Q96FF9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 ISCA2P1-201ENST00000425548 448 ntBASIC17.99■□□□□ 0.47
CDCA5Q96FF9 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 MIR4683-201ENST00000579659 81 ntBASIC17.99■□□□□ 0.47
CDCA5Q96FF9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDCA5Q96FF9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 AL160314.3-201ENST00000556041 767 ntBASIC17.98■□□□□ 0.47
CDCA5Q96FF9 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 AC103691.2-201ENST00000618824 433 ntBASIC17.98■□□□□ 0.47
CDCA5Q96FF9 AL603764.1-201ENST00000636452 321 ntBASIC17.98■□□□□ 0.47
CDCA5Q96FF9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA5Q96FF9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 AC055811.4-201ENST00000624039 1754 ntBASIC17.97■□□□□ 0.47
CDCA5Q96FF9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 AC026316.1-201ENST00000398900 414 ntBASIC17.97■□□□□ 0.47
CDCA5Q96FF9 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 PUDPP3-201ENST00000445368 636 ntBASIC17.97■□□□□ 0.47
CDCA5Q96FF9 MESTP3-201ENST00000503460 968 ntBASIC17.97■□□□□ 0.47
CDCA5Q96FF9 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 PGAM1P5-201ENST00000548011 764 ntBASIC17.97■□□□□ 0.47
CDCA5Q96FF9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 AC242376.1-201ENST00000559033 726 ntBASIC17.97■□□□□ 0.47
CDCA5Q96FF9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 SAMD11P1-201ENST00000571429 661 ntBASIC17.97■□□□□ 0.47
CDCA5Q96FF9 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
CDCA5Q96FF9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms