Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 MBP-201ENST00000354542 575 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 OR8T1P-201ENST00000421347 918 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AC007690.1-201ENST00000451924 468 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 ANKRD26P1-203ENST00000569528 966 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AC068134.4-201ENST00000613365 122 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AC018892.3-201ENST00000623986 2499 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 RN7SL23P-201ENST00000484055 275 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 HLA-J-204ENST00000495278 958 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AC048382.6-201ENST00000621980 1223 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AL355312.1-201ENST00000407115 2176 ntBASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 AC010141.1-201ENST00000411585 623 ntBASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 SHMT1P1-201ENST00000419974 1312 ntBASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC6.09□□□□□ -1.44
SYNE2Q8WXH0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 API5-208ENST00000531273 1868 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AC023968.2-201ENST00000560593 1049 ntBASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AC007292.2-201ENST00000593524 1812 ntBASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AC006277.1-201ENST00000624348 1610 ntBASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 AKR1C5P-201ENST00000427165 609 ntBASIC6.08□□□□□ -1.44
SYNE2Q8WXH0 ALDOAP1-201ENST00000491506 1078 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms