Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AC051619.7-201ENST00000568314 623 ntBASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AC073592.8-201ENST00000624126 511 ntBASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 AC107890.1-201ENST00000422478 521 ntBASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 TEX28P1-201ENST00000613479 1221 ntBASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 AL138828.2-201ENST00000615812 383 ntBASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 TEX28P2-201ENST00000617764 1221 ntBASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 SPDYE12P-201ENST00000618416 771 ntBASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TTC9CQ8N5M4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
TTC9CQ8N5M4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TTC9CQ8N5M4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
TTC9CQ8N5M4 AC073347.1-201ENST00000421633 2643 ntBASIC12.4□□□□□ -0.43
TTC9CQ8N5M4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TTC9CQ8N5M4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.4□□□□□ -0.43
TTC9CQ8N5M4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
TTC9CQ8N5M4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms