Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 KRT18P43-201ENST00000469825 1281 ntBASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 AC093028.1-201ENST00000622998 982 ntBASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 AC138969.3-201ENST00000546612 1459 ntBASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 AC138932.2-201ENST00000548268 1459 ntBASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 AC126755.4-201ENST00000549796 1459 ntBASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF440Q8IYI8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 AC139530.3-201ENST00000620344 690 ntBASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF440Q8IYI8 KRT18P28-201ENST00000453838 1332 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms