Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AC136604.1-201ENST00000418535 575 ntBASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AL596442.2-201ENST00000610240 980 ntBASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AC007967.4-201ENST00000614700 386 ntBASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AC007326.2-201ENST00000624224 7579 ntBASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 AL645939.2-201ENST00000427340 991 ntBASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 CNN2P11-201ENST00000429351 262 ntBASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 AC134684.3-201ENST00000641758 218 ntBASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00346Q8IVM7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 AC148477.4-201ENST00000613430 1793 ntBASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00346Q8IVM7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms