Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SPCS2P1-201ENST00000561636 679 ntBASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 AJ011932.1-201ENST00000621707 465 ntBASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 ALOX12P2-203ENST00000570921 1945 ntBASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 CICP4-201ENST00000447359 2812 ntBASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 SERBP1P3-201ENST00000459980 809 ntBASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 AC061975.2-201ENST00000581722 295 ntBASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 MIR4321-201ENST00000592276 80 ntBASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP1BQ7LBR1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHMP1BQ7LBR1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 BCRP1-201ENST00000444246 691 ntBASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHMP1BQ7LBR1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms