Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AC092580.3-201ENST00000430932 139 ntBASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AL450472.2-201ENST00000603663 1156 ntBASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AL590560.3-201ENST00000623350 461 ntBASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NIPAL1Q6NVV3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
NIPAL1Q6NVV3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 PHKG1P2-201ENST00000457537 863 ntBASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 AC011467.4-201ENST00000594891 528 ntBASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.14■□□□□ 0.01
NIPAL1Q6NVV3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NIPAL1Q6NVV3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms