Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.01□□□□□ -0.01
RSPO4Q2I0M5 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 KLF2P2-201ENST00000416807 1039 ntBASIC15□□□□□ -0.01
RSPO4Q2I0M5 AC104073.2-201ENST00000453737 312 ntBASIC15□□□□□ -0.01
RSPO4Q2I0M5 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 IGHV3-37-201ENST00000518544 340 ntBASIC15□□□□□ -0.01
RSPO4Q2I0M5 AP002490.2-201ENST00000524791 560 ntBASIC15□□□□□ -0.01
RSPO4Q2I0M5 AP002803.1-201ENST00000528836 498 ntBASIC15□□□□□ -0.01
RSPO4Q2I0M5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 AC242376.1-201ENST00000559033 726 ntBASIC15□□□□□ -0.01
RSPO4Q2I0M5 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 AC092171.3-201ENST00000610122 2651 ntBASIC15□□□□□ -0.01
RSPO4Q2I0M5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 AC020916.1-201ENST00000587762 1774 ntBASIC15□□□□□ -0.01
RSPO4Q2I0M5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15□□□□□ -0.01
RSPO4Q2I0M5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RSPO4Q2I0M5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 AL627231.1-201ENST00000394467 1125 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 AC012362.1-201ENST00000434906 739 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 PHKG1P2-201ENST00000457537 863 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 RN7SL596P-201ENST00000582123 288 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 RN7SL713P-201ENST00000582127 302 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 MIR4649-201ENST00000582839 64 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 BNIP3P13-201ENST00000599968 566 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 AC103810.10-201ENST00000606504 343 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 YRDCP1-201ENST00000621419 643 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 ENPP7P14-201ENST00000621765 1040 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 KRT8P4-201ENST00000509735 1454 ntBASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RSPO4Q2I0M5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms