Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.26□□□□□ -0.29
SSBP1Q04837 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.26□□□□□ -0.29
SSBP1Q04837 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.26□□□□□ -0.29
SSBP1Q04837 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 AC084364.1-201ENST00000551967 1556 ntBASIC13.26□□□□□ -0.29
SSBP1Q04837 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP1Q04837 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP1Q04837 AL121772.3-201ENST00000610840 674 ntBASIC13.26□□□□□ -0.29
SSBP1Q04837 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.26□□□□□ -0.29
SSBP1Q04837 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.26□□□□□ -0.29
SSBP1Q04837 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 AP000550.4-202ENST00000639755 178 ntBASIC13.26□□□□□ -0.29
SSBP1Q04837 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP1Q04837 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP1Q04837 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP1Q04837 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
SSBP1Q04837 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
SSBP1Q04837 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP1Q04837 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SSBP1Q04837 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SSBP1Q04837 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.25□□□□□ -0.29
SSBP1Q04837 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP1Q04837 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 AC105339.3-201ENST00000560043 636 ntBASIC13.25□□□□□ -0.29
SSBP1Q04837 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.25□□□□□ -0.29
SSBP1Q04837 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SSBP1Q04837 AC073389.1-201ENST00000595595 795 ntBASIC13.25□□□□□ -0.29
SSBP1Q04837 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 AC097359.3-201ENST00000603982 1210 ntBASIC13.25□□□□□ -0.29
SSBP1Q04837 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP1Q04837 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP1Q04837 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP1Q04837 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP1Q04837 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 AL359183.1-201ENST00000623796 2132 ntBASIC13.24□□□□□ -0.29
SSBP1Q04837 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP1Q04837 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SSBP1Q04837 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms