Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 AL662890.1-201ENST00000396818 632 ntBASIC17.63■□□□□ 0.41
CCNA1P78396 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.63■□□□□ 0.41
CCNA1P78396 FAM8A4P-201ENST00000435433 1213 ntBASIC17.63■□□□□ 0.41
CCNA1P78396 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.63■□□□□ 0.41
CCNA1P78396 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.63■□□□□ 0.41
CCNA1P78396 HSPB1P2-201ENST00000448722 546 ntBASIC17.63■□□□□ 0.41
CCNA1P78396 AC005077.2-201ENST00000449786 690 ntBASIC17.63■□□□□ 0.41
CCNA1P78396 RNA5SP423-201ENST00000517127 109 ntBASIC17.63■□□□□ 0.41
CCNA1P78396 AC126915.1-201ENST00000522847 1038 ntBASIC17.63■□□□□ 0.41
CCNA1P78396 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.63■□□□□ 0.41
CCNA1P78396 AC244157.2-201ENST00000616239 1006 ntBASIC17.63■□□□□ 0.41
CCNA1P78396 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.63■□□□□ 0.41
CCNA1P78396 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 AD000864.1-201ENST00000624076 2295 ntBASIC17.63■□□□□ 0.41
CCNA1P78396 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCNA1P78396 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCNA1P78396 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
CCNA1P78396 AL596087.1-201ENST00000400979 1969 ntBASIC17.62■□□□□ 0.41
CCNA1P78396 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCNA1P78396 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCNA1P78396 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCNA1P78396 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNA1P78396 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCNA1P78396 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.62■□□□□ 0.41
CCNA1P78396 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNA1P78396 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNA1P78396 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.62■□□□□ 0.41
CCNA1P78396 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCNA1P78396 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNA1P78396 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCNA1P78396 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.62■□□□□ 0.41
CCNA1P78396 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCNA1P78396 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.62■□□□□ 0.41
CCNA1P78396 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 AC124067.4-201ENST00000519691 2379 ntBASIC17.62■□□□□ 0.41
CCNA1P78396 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.62■□□□□ 0.41
CCNA1P78396 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCNA1P78396 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCNA1P78396 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCNA1P78396 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.61■□□□□ 0.41
CCNA1P78396 AL023775.1-201ENST00000454907 1746 ntBASIC17.61■□□□□ 0.41
CCNA1P78396 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCNA1P78396 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNA1P78396 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.61■□□□□ 0.41
CCNA1P78396 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNA1P78396 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNA1P78396 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.61■□□□□ 0.41
CCNA1P78396 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNA1P78396 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNA1P78396 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.61■□□□□ 0.41
CCNA1P78396 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CCNA1P78396 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCNA1P78396 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCNA1P78396 KRT8P14-201ENST00000414254 1442 ntBASIC17.61■□□□□ 0.41
CCNA1P78396 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.61■□□□□ 0.41
CCNA1P78396 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms