Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.47□□□□□ -0.09
SMIM11AP58511 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11AP58511 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMIM11AP58511 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SMIM11AP58511 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SMIM11AP58511 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SMIM11AP58511 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11AP58511 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.46□□□□□ -0.09
SMIM11AP58511 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.46□□□□□ -0.09
SMIM11AP58511 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SMIM11AP58511 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 HLA-A-201ENST00000376802 1334 ntBASIC14.46□□□□□ -0.09
SMIM11AP58511 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11AP58511 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11AP58511 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SMIM11AP58511 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.46□□□□□ -0.09
SMIM11AP58511 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 MIR346-201ENST00000362234 95 ntBASIC14.46□□□□□ -0.09
SMIM11AP58511 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11AP58511 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.46□□□□□ -0.09
SMIM11AP58511 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11AP58511 AC136604.1-201ENST00000418535 575 ntBASIC14.46□□□□□ -0.09
SMIM11AP58511 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.46□□□□□ -0.09
SMIM11AP58511 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.46□□□□□ -0.09
SMIM11AP58511 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.46□□□□□ -0.09
SMIM11AP58511 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11AP58511 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.46□□□□□ -0.09
SMIM11AP58511 HNRNPUP1-201ENST00000554987 333 ntBASIC14.46□□□□□ -0.09
SMIM11AP58511 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.46□□□□□ -0.09
SMIM11AP58511 KRT8P23-201ENST00000560090 1207 ntBASIC14.46□□□□□ -0.09
SMIM11AP58511 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.46□□□□□ -0.09
SMIM11AP58511 SLC25A6P4-201ENST00000586535 553 ntBASIC14.46□□□□□ -0.09
SMIM11AP58511 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SMIM11AP58511 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
SMIM11AP58511 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.46□□□□□ -0.09
SMIM11AP58511 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM11AP58511 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SMIM11AP58511 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SMIM11AP58511 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11AP58511 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11AP58511 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11AP58511 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SMIM11AP58511 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11AP58511 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM11AP58511 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SMIM11AP58511 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SMIM11AP58511 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.45□□□□□ -0.1
SMIM11AP58511 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SMIM11AP58511 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM11AP58511 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM11AP58511 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SMIM11AP58511 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM11AP58511 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMIM11AP58511 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.45□□□□□ -0.1
SMIM11AP58511 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SMIM11AP58511 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.45□□□□□ -0.1
SMIM11AP58511 IGHV3-62-201ENST00000520057 340 ntBASIC14.45□□□□□ -0.1
SMIM11AP58511 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
SMIM11AP58511 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.45□□□□□ -0.1
SMIM11AP58511 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.45□□□□□ -0.1
SMIM11AP58511 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM11AP58511 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.45□□□□□ -0.1
SMIM11AP58511 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.45□□□□□ -0.1
SMIM11AP58511 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.45□□□□□ -0.1
SMIM11AP58511 AL513190.1-201ENST00000621254 727 ntBASIC14.45□□□□□ -0.1
SMIM11AP58511 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMIM11AP58511 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM11AP58511 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms