Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC25A1P53007 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC25A1P53007 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLC25A1P53007 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SLC25A1P53007 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC25A1P53007 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC25A1P53007 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.9□□□□□ -0.18
SLC25A1P53007 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC25A1P53007 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.9□□□□□ -0.18
SLC25A1P53007 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
SLC25A1P53007 SLED1-202ENST00000512051 380 ntBASIC13.9□□□□□ -0.18
SLC25A1P53007 AP000344.2-201ENST00000512987 629 ntBASIC13.9□□□□□ -0.18
SLC25A1P53007 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 AC026150.2-201ENST00000564693 1156 ntBASIC13.9□□□□□ -0.18
SLC25A1P53007 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SLC25A1P53007 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
SLC25A1P53007 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLC25A1P53007 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SLC25A1P53007 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC25A1P53007 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.9□□□□□ -0.19
SLC25A1P53007 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.9□□□□□ -0.19
SLC25A1P53007 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SLC25A1P53007 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 AC232323.1-201ENST00000540724 2099 ntBASIC13.89□□□□□ -0.19
SLC25A1P53007 REXO1L5P-201ENST00000622260 2098 ntBASIC13.89□□□□□ -0.19
SLC25A1P53007 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.89□□□□□ -0.19
SLC25A1P53007 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC25A1P53007 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 MTND6P24-201ENST00000440466 518 ntBASIC13.89□□□□□ -0.19
SLC25A1P53007 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC25A1P53007 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms