Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB5CP51148 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.64□□□□□ -0.39
RAB5CP51148 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RAB5CP51148 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RAB5CP51148 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RAB5CP51148 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB5CP51148 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB5CP51148 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 AC152010.1-201ENST00000415779 2006 ntBASIC12.63□□□□□ -0.39
RAB5CP51148 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB5CP51148 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB5CP51148 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB5CP51148 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB5CP51148 VENTXP5-201ENST00000523979 775 ntBASIC12.63□□□□□ -0.39
RAB5CP51148 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB5CP51148 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB5CP51148 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
RAB5CP51148 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB5CP51148 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB5CP51148 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB5CP51148 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB5CP51148 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms