Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SART3-203ENST00000546611 1184 ntBASIC12.43□□□□□ -0.42
CDC34P49427 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.43□□□□□ -0.42
CDC34P49427 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.43□□□□□ -0.42
CDC34P49427 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC34P49427 AC116407.4-201ENST00000623319 1061 ntBASIC12.43□□□□□ -0.42
CDC34P49427 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CDC34P49427 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC34P49427 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC34P49427 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CDC34P49427 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.42□□□□□ -0.42
CDC34P49427 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.42□□□□□ -0.42
CDC34P49427 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.42□□□□□ -0.42
CDC34P49427 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.42□□□□□ -0.42
CDC34P49427 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.42□□□□□ -0.42
CDC34P49427 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.42□□□□□ -0.42
CDC34P49427 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CDC34P49427 LAGE3P1-201ENST00000425356 484 ntBASIC12.42□□□□□ -0.42
CDC34P49427 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.42□□□□□ -0.42
CDC34P49427 KRT18P34-201ENST00000488218 1270 ntBASIC12.42□□□□□ -0.42
CDC34P49427 FAM86EP-206ENST00000510506 987 ntBASIC12.42□□□□□ -0.42
CDC34P49427 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.42□□□□□ -0.42
CDC34P49427 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.42□□□□□ -0.42
CDC34P49427 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 MIR3180-1-201ENST00000580374 94 ntBASIC12.42□□□□□ -0.42
CDC34P49427 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.42□□□□□ -0.42
CDC34P49427 MIR3180-3-201ENST00000584616 94 ntBASIC12.42□□□□□ -0.42
CDC34P49427 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CDC34P49427 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 AC006504.5-208ENST00000588784 2401 ntBASIC12.42□□□□□ -0.42
CDC34P49427 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CDC34P49427 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 LINC01230-201ENST00000625222 3017 ntBASIC12.42□□□□□ -0.42
CDC34P49427 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.42□□□□□ -0.42
CDC34P49427 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 AC018892.3-201ENST00000623986 2499 ntBASIC12.42□□□□□ -0.42
CDC34P49427 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC34P49427 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms