Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.29■□□□□ 0.2
FNTAP49354 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.29■□□□□ 0.2
FNTAP49354 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
FNTAP49354 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 AL122018.1-201ENST00000446607 2310 ntBASIC16.29■□□□□ 0.2
FNTAP49354 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.29■□□□□ 0.2
FNTAP49354 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.29■□□□□ 0.2
FNTAP49354 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
FNTAP49354 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FNTAP49354 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
FNTAP49354 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
FNTAP49354 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNTAP49354 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 AC117489.1-201ENST00000625169 3217 ntBASIC16.28■□□□□ 0.2
FNTAP49354 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 AC107918.4-201ENST00000641966 3141 ntBASIC16.28■□□□□ 0.2
FNTAP49354 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FNTAP49354 WASH3P-207ENST00000560956 1394 ntBASIC16.28■□□□□ 0.2
FNTAP49354 FO538757.1-201ENST00000623083 1397 ntBASIC16.28■□□□□ 0.2
FNTAP49354 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FNTAP49354 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 FAM8A3P-201ENST00000427218 844 ntBASIC16.28■□□□□ 0.2
FNTAP49354 ADH5P3-201ENST00000433842 1137 ntBASIC16.28■□□□□ 0.2
FNTAP49354 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.28■□□□□ 0.2
FNTAP49354 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.28■□□□□ 0.2
FNTAP49354 AC091812.2-201ENST00000619081 385 ntBASIC16.28■□□□□ 0.2
FNTAP49354 AL607033.1-201ENST00000623900 1599 ntBASIC16.28■□□□□ 0.2
FNTAP49354 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FNTAP49354 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.28■□□□□ 0.2
FNTAP49354 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNTAP49354 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.27■□□□□ 0.2
FNTAP49354 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.27■□□□□ 0.2
FNTAP49354 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.27■□□□□ 0.2
FNTAP49354 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
FNTAP49354 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.27■□□□□ 0.2
FNTAP49354 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.27■□□□□ 0.2
FNTAP49354 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
FNTAP49354 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.27■□□□□ 0.2
FNTAP49354 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.27■□□□□ 0.2
FNTAP49354 AC009078.2-202ENST00000463353 338 ntBASIC16.27■□□□□ 0.2
FNTAP49354 RPL13AP23-201ENST00000480739 586 ntBASIC16.27■□□□□ 0.2
FNTAP49354 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.27■□□□□ 0.2
FNTAP49354 RNA5SP416-201ENST00000516838 111 ntBASIC16.27■□□□□ 0.2
FNTAP49354 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.27■□□□□ 0.2
FNTAP49354 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.27■□□□□ 0.2
FNTAP49354 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.27■□□□□ 0.2
FNTAP49354 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.27■□□□□ 0.2
FNTAP49354 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.27■□□□□ 0.2
FNTAP49354 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.27■□□□□ 0.2
FNTAP49354 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNTAP49354 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
FNTAP49354 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNTAP49354 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FNTAP49354 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.27■□□□□ 0.19
FNTAP49354 AC006504.5-208ENST00000588784 2401 ntBASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms