Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AL035456.1-201ENST00000456064 1369 ntBASIC15.23■□□□□ 0.03
KRT6CP48668 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
KRT6CP48668 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
KRT6CP48668 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT6CP48668 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT6CP48668 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT6CP48668 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KRT6CP48668 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT6CP48668 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
KRT6CP48668 SPDYE17-201ENST00000412399 783 ntBASIC15.22■□□□□ 0.03
KRT6CP48668 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT6CP48668 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.22■□□□□ 0.03
KRT6CP48668 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 AC093520.2-201ENST00000561830 333 ntBASIC15.22■□□□□ 0.03
KRT6CP48668 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 AC007967.4-201ENST00000614700 386 ntBASIC15.22■□□□□ 0.03
KRT6CP48668 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KRT6CP48668 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
KRT6CP48668 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 AL607033.1-201ENST00000623900 1599 ntBASIC15.22■□□□□ 0.03
KRT6CP48668 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KRT6CP48668 KRT8P44-201ENST00000441609 1350 ntBASIC15.22■□□□□ 0.03
KRT6CP48668 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT6CP48668 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.22■□□□□ 0.03
KRT6CP48668 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT6CP48668 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KRT6CP48668 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT6CP48668 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6CP48668 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
KRT6CP48668 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT6CP48668 BANF1P1-201ENST00000553684 263 ntBASIC15.21■□□□□ 0.03
KRT6CP48668 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT6CP48668 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6CP48668 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KRT6CP48668 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6CP48668 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6CP48668 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT6CP48668 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT6CP48668 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
KRT6CP48668 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT6CP48668 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT6CP48668 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.21■□□□□ 0.02
KRT6CP48668 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KRT6CP48668 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.21■□□□□ 0.02
KRT6CP48668 SBF1P1-201ENST00000444527 5631 ntBASIC15.21■□□□□ 0.02
KRT6CP48668 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.21■□□□□ 0.02
KRT6CP48668 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT6CP48668 TNRC18P2-201ENST00000417666 2714 ntBASIC15.21■□□□□ 0.02
KRT6CP48668 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms