Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.55■□□□□ 0.24
BRCC3P46736 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.55■□□□□ 0.24
BRCC3P46736 AC016694.1-201ENST00000434179 700 ntBASIC16.55■□□□□ 0.24
BRCC3P46736 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.55■□□□□ 0.24
BRCC3P46736 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.55■□□□□ 0.24
BRCC3P46736 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.55■□□□□ 0.24
BRCC3P46736 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.55■□□□□ 0.24
BRCC3P46736 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.55■□□□□ 0.24
BRCC3P46736 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.55■□□□□ 0.24
BRCC3P46736 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
BRCC3P46736 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.55■□□□□ 0.24
BRCC3P46736 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.55■□□□□ 0.24
BRCC3P46736 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.55■□□□□ 0.24
BRCC3P46736 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.55■□□□□ 0.24
BRCC3P46736 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.55■□□□□ 0.24
BRCC3P46736 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
BRCC3P46736 DOC2GP-204ENST00000639052 2548 ntBASIC16.55■□□□□ 0.24
BRCC3P46736 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
BRCC3P46736 REXO1L6P-201ENST00000603433 1515 ntBASIC16.55■□□□□ 0.24
BRCC3P46736 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRCC3P46736 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.54■□□□□ 0.24
BRCC3P46736 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.54■□□□□ 0.24
BRCC3P46736 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.54■□□□□ 0.24
BRCC3P46736 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
BRCC3P46736 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.54■□□□□ 0.24
BRCC3P46736 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.54■□□□□ 0.24
BRCC3P46736 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
BRCC3P46736 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.54■□□□□ 0.24
BRCC3P46736 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
BRCC3P46736 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.54■□□□□ 0.24
BRCC3P46736 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.54■□□□□ 0.24
BRCC3P46736 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.54■□□□□ 0.24
BRCC3P46736 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.54■□□□□ 0.24
BRCC3P46736 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.54■□□□□ 0.24
BRCC3P46736 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.54■□□□□ 0.24
BRCC3P46736 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.54■□□□□ 0.24
BRCC3P46736 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.54■□□□□ 0.24
BRCC3P46736 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
BRCC3P46736 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 AC084364.1-201ENST00000551967 1556 ntBASIC16.54■□□□□ 0.24
BRCC3P46736 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
BRCC3P46736 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.54■□□□□ 0.24
BRCC3P46736 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
BRCC3P46736 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BRCC3P46736 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.53■□□□□ 0.24
BRCC3P46736 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.53■□□□□ 0.24
BRCC3P46736 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.53■□□□□ 0.24
BRCC3P46736 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.53■□□□□ 0.24
BRCC3P46736 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BRCC3P46736 CSF2RBP1-201ENST00000447905 391 ntBASIC16.53■□□□□ 0.24
BRCC3P46736 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
BRCC3P46736 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.53■□□□□ 0.24
BRCC3P46736 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.53■□□□□ 0.24
BRCC3P46736 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.53■□□□□ 0.24
BRCC3P46736 AP000812.2-201ENST00000538934 718 ntBASIC16.53■□□□□ 0.24
BRCC3P46736 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.53■□□□□ 0.24
BRCC3P46736 MIR6799-201ENST00000620297 69 ntBASIC16.53■□□□□ 0.24
BRCC3P46736 BX539320.1-201ENST00000623759 877 ntBASIC16.53■□□□□ 0.24
BRCC3P46736 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms