Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPDP35247 AL513477.1-201ENST00000602865 2407 ntBASIC14.2□□□□□ -0.14
SFTPDP35247 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPDP35247 AC236430.1-201ENST00000402231 743 ntBASIC14.2□□□□□ -0.14
SFTPDP35247 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPDP35247 AL589987.1-201ENST00000453380 819 ntBASIC14.2□□□□□ -0.14
SFTPDP35247 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.2□□□□□ -0.14
SFTPDP35247 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.2□□□□□ -0.14
SFTPDP35247 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.2□□□□□ -0.14
SFTPDP35247 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.2□□□□□ -0.14
SFTPDP35247 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SFTPDP35247 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SFTPDP35247 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SFTPDP35247 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SFTPDP35247 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPDP35247 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPDP35247 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPDP35247 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPDP35247 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SFTPDP35247 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPDP35247 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 SPDYE19P-201ENST00000338590 713 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 MIR661-201ENST00000384842 89 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SFTPDP35247 RPL13P2-201ENST00000440687 659 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 AC002472.2-201ENST00000442739 958 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 GNAQP1-201ENST00000444815 1067 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 DOC2GP-202ENST00000514950 1163 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.19□□□□□ -0.14
SFTPDP35247 RN7SL204P-201ENST00000582831 262 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPDP35247 LINC02560-201ENST00000596379 459 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 SRD5A3P1-201ENST00000603021 949 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 AC004233.3-201ENST00000607794 1269 ntBASIC14.19□□□□□ -0.14
SFTPDP35247 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.19□□□□□ -0.14
SFTPDP35247 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SFTPDP35247 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.19□□□□□ -0.14
SFTPDP35247 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SFTPDP35247 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPDP35247 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SFTPDP35247 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.19□□□□□ -0.14
SFTPDP35247 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SFTPDP35247 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPDP35247 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPDP35247 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SFTPDP35247 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SFTPDP35247 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.18□□□□□ -0.14
SFTPDP35247 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.18□□□□□ -0.14
SFTPDP35247 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.18□□□□□ -0.14
SFTPDP35247 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms