Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.83■□□□□ 0.6
KCNA3P22001 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.83■□□□□ 0.6
KCNA3P22001 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.83■□□□□ 0.6
KCNA3P22001 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KCNA3P22001 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
KCNA3P22001 TBC1D3J-201ENST00000620719 1426 ntBASIC18.83■□□□□ 0.6
KCNA3P22001 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.83■□□□□ 0.6
KCNA3P22001 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.82■□□□□ 0.6
KCNA3P22001 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KCNA3P22001 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 AC092171.3-201ENST00000610122 2651 ntBASIC18.82■□□□□ 0.6
KCNA3P22001 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.82■□□□□ 0.6
KCNA3P22001 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.82■□□□□ 0.6
KCNA3P22001 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.82■□□□□ 0.6
KCNA3P22001 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KCNA3P22001 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KCNA3P22001 AL627231.1-201ENST00000394467 1125 ntBASIC18.82■□□□□ 0.6
KCNA3P22001 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.82■□□□□ 0.6
KCNA3P22001 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.82■□□□□ 0.6
KCNA3P22001 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.82■□□□□ 0.6
KCNA3P22001 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.82■□□□□ 0.6
KCNA3P22001 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
KCNA3P22001 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
KCNA3P22001 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KCNA3P22001 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
KCNA3P22001 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KCNA3P22001 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KCNA3P22001 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNA3P22001 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNA3P22001 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KCNA3P22001 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNA3P22001 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
KCNA3P22001 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KCNA3P22001 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNA3P22001 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNA3P22001 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNA3P22001 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.81■□□□□ 0.6
KCNA3P22001 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.81■□□□□ 0.6
KCNA3P22001 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.81■□□□□ 0.6
KCNA3P22001 AL136295.7-201ENST00000619226 1200 ntBASIC18.81■□□□□ 0.6
KCNA3P22001 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.81■□□□□ 0.6
KCNA3P22001 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.81■□□□□ 0.6
KCNA3P22001 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNA3P22001 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.8■□□□□ 0.6
KCNA3P22001 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KCNA3P22001 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNA3P22001 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNA3P22001 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNA3P22001 AC097065.1-201ENST00000425737 517 ntBASIC18.8■□□□□ 0.6
KCNA3P22001 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms