Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PTPN1P18031 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN1P18031 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PTPN1P18031 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN1P18031 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PTPN1P18031 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN1P18031 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTPN1P18031 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PTPN1P18031 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN1P18031 KRT17P7-201ENST00000451704 1104 ntBASIC16.52■□□□□ 0.24
PTPN1P18031 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN1P18031 RN7SL837P-201ENST00000463010 287 ntBASIC16.52■□□□□ 0.24
PTPN1P18031 AC026410.3-201ENST00000514280 936 ntBASIC16.52■□□□□ 0.24
PTPN1P18031 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN1P18031 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.52■□□□□ 0.24
PTPN1P18031 AC120045.2-201ENST00000567334 178 ntBASIC16.52■□□□□ 0.24
PTPN1P18031 AC124283.3-201ENST00000570869 594 ntBASIC16.52■□□□□ 0.24
PTPN1P18031 AC132938.2-201ENST00000579188 680 ntBASIC16.52■□□□□ 0.24
PTPN1P18031 AL591163.1-201ENST00000641757 987 ntBASIC16.52■□□□□ 0.24
PTPN1P18031 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN1P18031 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.52■□□□□ 0.23
PTPN1P18031 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PTPN1P18031 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN1P18031 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
PTPN1P18031 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN1P18031 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PTPN1P18031 KRT8P22-201ENST00000562317 1415 ntBASIC16.52■□□□□ 0.23
PTPN1P18031 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN1P18031 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN1P18031 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN1P18031 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PTPN1P18031 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
PTPN1P18031 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN1P18031 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.52■□□□□ 0.23
PTPN1P18031 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.52■□□□□ 0.23
PTPN1P18031 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN1P18031 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.51■□□□□ 0.23
PTPN1P18031 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 AC084364.1-201ENST00000551967 1556 ntBASIC16.51■□□□□ 0.23
PTPN1P18031 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN1P18031 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN1P18031 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN1P18031 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN1P18031 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN1P18031 AC068418.2-201ENST00000577309 3703 ntBASIC16.51■□□□□ 0.23
PTPN1P18031 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PTPN1P18031 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.51■□□□□ 0.23
PTPN1P18031 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 AL512384.1-201ENST00000406683 331 ntBASIC16.51■□□□□ 0.23
PTPN1P18031 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN1P18031 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.51■□□□□ 0.23
PTPN1P18031 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN1P18031 AC025181.2-201ENST00000606994 802 ntBASIC16.51■□□□□ 0.23
PTPN1P18031 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.51■□□□□ 0.23
PTPN1P18031 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN1P18031 IGHV3-72-202ENST00000621503 303 ntBASIC16.51■□□□□ 0.23
PTPN1P18031 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN1P18031 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PTPN1P18031 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 PAUPAR-201ENST00000630360 2965 ntBASIC16.51■□□□□ 0.23
PTPN1P18031 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTPN1P18031 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN1P18031 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN1P18031 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTPN1P18031 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN1P18031 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN1P18031 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN1P18031 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms