Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.08■□□□□ 0.81
COL5A2P05997 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
COL5A2P05997 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.08■□□□□ 0.81
COL5A2P05997 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
COL5A2P05997 AC135983.4-201ENST00000564116 1262 ntBASIC20.08■□□□□ 0.81
COL5A2P05997 DUX4L46-201ENST00000566845 751 ntBASIC20.08■□□□□ 0.81
COL5A2P05997 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 MEG3_2.1-201ENST00000611456 105 ntBASIC20.08■□□□□ 0.81
COL5A2P05997 WT1-AS_6.1-201ENST00000614919 121 ntBASIC20.08■□□□□ 0.81
COL5A2P05997 AC051619.9-201ENST00000623237 597 ntBASIC20.08■□□□□ 0.81
COL5A2P05997 NAP1L6-202ENST00000641404 1222 ntBASIC20.08■□□□□ 0.81
COL5A2P05997 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL5A2P05997 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.08■□□□□ 0.8
COL5A2P05997 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
COL5A2P05997 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL5A2P05997 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL5A2P05997 FAM90A7P-201ENST00000382628 1395 ntBASIC20.08■□□□□ 0.8
COL5A2P05997 FAM90A23P-201ENST00000400136 1395 ntBASIC20.08■□□□□ 0.8
COL5A2P05997 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL5A2P05997 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
COL5A2P05997 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
COL5A2P05997 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL5A2P05997 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL5A2P05997 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL5A2P05997 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.08■□□□□ 0.8
COL5A2P05997 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.08■□□□□ 0.8
COL5A2P05997 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL5A2P05997 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
COL5A2P05997 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 AC092364.2-201ENST00000596710 2692 ntBASIC20.07■□□□□ 0.8
COL5A2P05997 AL157414.3-201ENST00000624276 1954 ntBASIC20.07■□□□□ 0.8
COL5A2P05997 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.07■□□□□ 0.8
COL5A2P05997 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 PFN2-202ENST00000423691 911 ntTSL 2 BASIC20.07■□□□□ 0.8
COL5A2P05997 RPL13AP19-201ENST00000434320 584 ntBASIC20.07■□□□□ 0.8
COL5A2P05997 KLF2P1-201ENST00000447438 1042 ntBASIC20.07■□□□□ 0.8
COL5A2P05997 RN7SL8P-201ENST00000461771 266 ntBASIC20.07■□□□□ 0.8
COL5A2P05997 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COL5A2P05997 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COL5A2P05997 MST1L-201ENST00000442552 2185 ntBASIC20.07■□□□□ 0.8
COL5A2P05997 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
COL5A2P05997 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 TBC1D3J-201ENST00000620719 1426 ntBASIC20.07■□□□□ 0.8
COL5A2P05997 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL5A2P05997 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL5A2P05997 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
COL5A2P05997 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL5A2P05997 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL5A2P05997 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COL5A2P05997 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
COL5A2P05997 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COL5A2P05997 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.06■□□□□ 0.8
COL5A2P05997 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.06■□□□□ 0.8
COL5A2P05997 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.06■□□□□ 0.8
COL5A2P05997 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC20.06■□□□□ 0.8
COL5A2P05997 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.06■□□□□ 0.8
COL5A2P05997 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.06■□□□□ 0.8
COL5A2P05997 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.06■□□□□ 0.8
COL5A2P05997 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL5A2P05997 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC20.06■□□□□ 0.8
COL5A2P05997 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC20.06■□□□□ 0.8
COL5A2P05997 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COL5A2P05997 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.06■□□□□ 0.8
COL5A2P05997 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.06■□□□□ 0.8
COL5A2P05997 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COL5A2P05997 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.06■□□□□ 0.8
COL5A2P05997 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 MBLAC2-202ENST00000514906 1936 ntBASIC20.06■□□□□ 0.8
COL5A2P05997 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL5A2P05997 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL5A2P05997 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL5A2P05997 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL5A2P05997 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms