Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
POLR3DP05423 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR3DP05423 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR3DP05423 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
POLR3DP05423 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR3DP05423 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
POLR3DP05423 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR3DP05423 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
POLR3DP05423 GPR53P-205ENST00000457298 1084 ntBASIC18.68■□□□□ 0.58
POLR3DP05423 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR3DP05423 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
POLR3DP05423 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR3DP05423 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
POLR3DP05423 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR3DP05423 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
POLR3DP05423 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
POLR3DP05423 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR3DP05423 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3DP05423 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR3DP05423 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3DP05423 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR3DP05423 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR3DP05423 AC007389.4-201ENST00000454674 793 ntBASIC18.67■□□□□ 0.58
POLR3DP05423 AL359711.2-201ENST00000563105 872 ntBASIC18.67■□□□□ 0.58
POLR3DP05423 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3DP05423 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3DP05423 BRI3BPP1-201ENST00000594224 787 ntBASIC18.67■□□□□ 0.58
POLR3DP05423 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR3DP05423 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR3DP05423 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3DP05423 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR3DP05423 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
POLR3DP05423 AL121723.1-201ENST00000445194 1519 ntBASIC18.67■□□□□ 0.58
POLR3DP05423 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3DP05423 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3DP05423 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
POLR3DP05423 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR3DP05423 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR3DP05423 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 KRT8P22-201ENST00000562317 1415 ntBASIC18.66■□□□□ 0.58
POLR3DP05423 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
POLR3DP05423 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
POLR3DP05423 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
POLR3DP05423 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
POLR3DP05423 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3DP05423 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
POLR3DP05423 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 AC134915.1-201ENST00000426461 574 ntBASIC18.66■□□□□ 0.58
POLR3DP05423 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3DP05423 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3DP05423 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
POLR3DP05423 KRT18P43-201ENST00000469825 1281 ntBASIC18.66■□□□□ 0.58
POLR3DP05423 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.66■□□□□ 0.58
POLR3DP05423 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR3DP05423 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3DP05423 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR3DP05423 AC010319.3-201ENST00000597028 470 ntBASIC18.66■□□□□ 0.58
POLR3DP05423 AL049840.4-201ENST00000602422 811 ntBASIC18.66■□□□□ 0.58
POLR3DP05423 AL008721.1-201ENST00000609964 604 ntBASIC18.66■□□□□ 0.58
POLR3DP05423 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR3DP05423 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
POLR3DP05423 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms