Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
TCRAP04437 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRAP04437 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TCRAP04437 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.95□□□□□ -0.5
TCRAP04437 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
TCRAP04437 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.95□□□□□ -0.5
TCRAP04437 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 RPS8P6-201ENST00000426177 609 ntBASIC11.95□□□□□ -0.5
TCRAP04437 KRT18P67-201ENST00000432816 1264 ntBASIC11.95□□□□□ -0.5
TCRAP04437 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRAP04437 AC092910.1-201ENST00000482027 1129 ntBASIC11.95□□□□□ -0.5
TCRAP04437 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRAP04437 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRAP04437 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRAP04437 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.95□□□□□ -0.5
TCRAP04437 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRAP04437 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TCRAP04437 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRAP04437 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TCRAP04437 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRAP04437 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TCRAP04437 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRAP04437 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
TCRAP04437 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TCRAP04437 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRAP04437 RPL5P21-201ENST00000404620 815 ntBASIC11.94□□□□□ -0.5
TCRAP04437 UPK3BP1-201ENST00000428678 509 ntBASIC11.94□□□□□ -0.5
TCRAP04437 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.94□□□□□ -0.5
TCRAP04437 HCG4B-203ENST00000450128 991 ntBASIC11.94□□□□□ -0.5
TCRAP04437 PHKG1P2-201ENST00000457537 863 ntBASIC11.94□□□□□ -0.5
TCRAP04437 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.94□□□□□ -0.5
TCRAP04437 KRT18P35-201ENST00000510488 1269 ntBASIC11.94□□□□□ -0.5
TCRAP04437 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 UNC93B6-202ENST00000528242 690 ntBASIC11.94□□□□□ -0.5
TCRAP04437 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.94□□□□□ -0.5
TCRAP04437 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.94□□□□□ -0.5
TCRAP04437 SPTSSB-204ENST00000617024 1292 ntBASIC11.94□□□□□ -0.5
TCRAP04437 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.94□□□□□ -0.5
TCRAP04437 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TCRAP04437 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRAP04437 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRAP04437 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRAP04437 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms