Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.04■□□□□ -0
SEMA3DO95025 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.04■□□□□ -0
SEMA3DO95025 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 Z97205.2-201ENST00000564697 1639 ntBASIC15.04■□□□□ -0
SEMA3DO95025 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.04■□□□□ -0
SEMA3DO95025 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.04■□□□□ -0
SEMA3DO95025 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.04■□□□□ -0
SEMA3DO95025 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.04■□□□□ -0
SEMA3DO95025 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SEMA3DO95025 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.04■□□□□ -0
SEMA3DO95025 AC140878.1-201ENST00000565277 250 ntBASIC15.04■□□□□ -0
SEMA3DO95025 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.04■□□□□ -0
SEMA3DO95025 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 TEX28P1-201ENST00000613479 1221 ntBASIC15.04■□□□□ -0
SEMA3DO95025 TEX28P2-201ENST00000617764 1221 ntBASIC15.04■□□□□ -0
SEMA3DO95025 AC073592.8-201ENST00000624126 511 ntBASIC15.04■□□□□ -0
SEMA3DO95025 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 SBF1P1-201ENST00000444527 5631 ntBASIC15.04■□□□□ -0
SEMA3DO95025 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEMA3DO95025 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.04■□□□□ -0
SEMA3DO95025 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 AC073347.1-201ENST00000421633 2643 ntBASIC15.03■□□□□ -0
SEMA3DO95025 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.03■□□□□ -0
SEMA3DO95025 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SEMA3DO95025 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 AC107890.1-201ENST00000422478 521 ntBASIC15.03■□□□□ -0
SEMA3DO95025 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.03■□□□□ -0
SEMA3DO95025 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.03■□□□□ -0
SEMA3DO95025 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.03■□□□□ -0
SEMA3DO95025 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.03■□□□□ -0
SEMA3DO95025 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.03■□□□□ -0
SEMA3DO95025 AC025048.3-201ENST00000590609 569 ntBASIC15.03■□□□□ -0
SEMA3DO95025 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.03■□□□□ -0
SEMA3DO95025 AL138828.2-201ENST00000615812 383 ntBASIC15.03■□□□□ -0
SEMA3DO95025 AC005702.4-201ENST00000618393 416 ntBASIC15.03■□□□□ -0
SEMA3DO95025 AC139530.3-201ENST00000620344 690 ntBASIC15.03■□□□□ -0
SEMA3DO95025 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
SEMA3DO95025 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.03■□□□□ -0
SEMA3DO95025 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3DO95025 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
SEMA3DO95025 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.03■□□□□ -0
SEMA3DO95025 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEMA3DO95025 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms