Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.72□□□□□ -0.05
LDB3O75112 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.72□□□□□ -0.05
LDB3O75112 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.72□□□□□ -0.05
LDB3O75112 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.72□□□□□ -0.05
LDB3O75112 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.72□□□□□ -0.05
LDB3O75112 AC092364.2-202ENST00000597012 1073 ntBASIC14.72□□□□□ -0.05
LDB3O75112 AC004233.3-201ENST00000607794 1269 ntBASIC14.72□□□□□ -0.05
LDB3O75112 AL158212.4-201ENST00000624062 1286 ntBASIC14.72□□□□□ -0.05
LDB3O75112 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 AP002414.2-201ENST00000591780 3365 ntBASIC14.72□□□□□ -0.05
LDB3O75112 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
LDB3O75112 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.72□□□□□ -0.05
LDB3O75112 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.72□□□□□ -0.05
LDB3O75112 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 AL121723.1-201ENST00000445194 1519 ntBASIC14.71□□□□□ -0.05
LDB3O75112 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
LDB3O75112 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LDB3O75112 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.71□□□□□ -0.05
LDB3O75112 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
LDB3O75112 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LDB3O75112 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.71□□□□□ -0.05
LDB3O75112 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.71□□□□□ -0.05
LDB3O75112 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.71□□□□□ -0.05
LDB3O75112 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 PPT1-215ENST00000641471 2368 ntBASIC14.71□□□□□ -0.05
LDB3O75112 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LDB3O75112 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.71□□□□□ -0.05
LDB3O75112 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LDB3O75112 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
LDB3O75112 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LDB3O75112 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.71□□□□□ -0.06
LDB3O75112 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LDB3O75112 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.71□□□□□ -0.06
LDB3O75112 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LDB3O75112 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LDB3O75112 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
LDB3O75112 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.7□□□□□ -0.06
LDB3O75112 AC138969.3-201ENST00000546612 1459 ntBASIC14.7□□□□□ -0.06
LDB3O75112 AC138932.2-201ENST00000548268 1459 ntBASIC14.7□□□□□ -0.06
LDB3O75112 AC126755.4-201ENST00000549796 1459 ntBASIC14.7□□□□□ -0.06
LDB3O75112 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
LDB3O75112 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LDB3O75112 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.7□□□□□ -0.06
LDB3O75112 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
LDB3O75112 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
LDB3O75112 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.7□□□□□ -0.06
LDB3O75112 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LDB3O75112 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.7□□□□□ -0.06
LDB3O75112 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LDB3O75112 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.7□□□□□ -0.06
LDB3O75112 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.7□□□□□ -0.06
LDB3O75112 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.7□□□□□ -0.06
LDB3O75112 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.7□□□□□ -0.06
LDB3O75112 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LDB3O75112 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.7□□□□□ -0.06
LDB3O75112 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LDB3O75112 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LDB3O75112 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.7□□□□□ -0.06
LDB3O75112 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LDB3O75112 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LDB3O75112 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms