Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC073347.1-201ENST00000421633 2643 ntBASIC15.79■□□□□ 0.12
PRAMEF11O60813 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC134915.1-201ENST00000426461 574 ntBASIC15.79■□□□□ 0.12
PRAMEF11O60813 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC120045.2-201ENST00000567334 178 ntBASIC15.79■□□□□ 0.12
PRAMEF11O60813 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC027307.3-201ENST00000594262 1100 ntBASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC107373.2-201ENST00000607735 490 ntBASIC15.79■□□□□ 0.12
PRAMEF11O60813 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC025048.6-201ENST00000634326 1161 ntBASIC15.79■□□□□ 0.12
PRAMEF11O60813 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AC092384.3-202ENST00000564646 2873 ntBASIC15.79■□□□□ 0.12
PRAMEF11O60813 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEF11O60813 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 AL035633.1-201ENST00000406139 838 ntBASIC15.78■□□□□ 0.12
PRAMEF11O60813 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 AC126365.1-201ENST00000578585 1514 ntBASIC15.78■□□□□ 0.12
PRAMEF11O60813 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 AC013268.4-201ENST00000637413 2228 ntBASIC15.78■□□□□ 0.12
PRAMEF11O60813 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PRAMEF11O60813 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF11O60813 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF11O60813 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF11O60813 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF11O60813 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF11O60813 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF11O60813 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF11O60813 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.77■□□□□ 0.12
PRAMEF11O60813 AL359711.2-201ENST00000563105 872 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms