Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SSSCA1O60232 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 CXCL1P1-201ENST00000502804 216 ntBASIC12.83□□□□□ -0.36
SSSCA1O60232 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SSSCA1O60232 OR7E14P-202ENST00000530490 1290 ntBASIC12.83□□□□□ -0.36
SSSCA1O60232 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.83□□□□□ -0.36
SSSCA1O60232 AC243562.2-201ENST00000561247 970 ntBASIC12.83□□□□□ -0.36
SSSCA1O60232 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.83□□□□□ -0.36
SSSCA1O60232 AC002347.1-201ENST00000569543 541 ntBASIC12.83□□□□□ -0.36
SSSCA1O60232 OR7E47P-204ENST00000575924 449 ntBASIC12.83□□□□□ -0.36
SSSCA1O60232 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.83□□□□□ -0.36
SSSCA1O60232 AL078644.1-201ENST00000609881 752 ntBASIC12.83□□□□□ -0.36
SSSCA1O60232 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SSSCA1O60232 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.83□□□□□ -0.36
SSSCA1O60232 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SSSCA1O60232 AC041040.2-201ENST00000622926 2899 ntBASIC12.83□□□□□ -0.36
SSSCA1O60232 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.83□□□□□ -0.36
SSSCA1O60232 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SSSCA1O60232 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SSSCA1O60232 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SSSCA1O60232 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.83□□□□□ -0.36
SSSCA1O60232 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.83□□□□□ -0.36
SSSCA1O60232 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.83□□□□□ -0.36
SSSCA1O60232 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SSSCA1O60232 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.82□□□□□ -0.36
SSSCA1O60232 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SSSCA1O60232 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 REXO1L1P-202ENST00000608646 1974 ntBASIC12.82□□□□□ -0.36
SSSCA1O60232 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.82□□□□□ -0.36
SSSCA1O60232 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SSSCA1O60232 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SSSCA1O60232 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SSSCA1O60232 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 RPS2P1-201ENST00000434010 821 ntBASIC12.82□□□□□ -0.36
SSSCA1O60232 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.82□□□□□ -0.36
SSSCA1O60232 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SSSCA1O60232 AC108073.2-201ENST00000464002 357 ntBASIC12.82□□□□□ -0.36
SSSCA1O60232 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.82□□□□□ -0.36
SSSCA1O60232 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.82□□□□□ -0.36
SSSCA1O60232 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.82□□□□□ -0.36
SSSCA1O60232 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.82□□□□□ -0.36
SSSCA1O60232 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.82□□□□□ -0.36
SSSCA1O60232 AC004790.2-201ENST00000623588 572 ntBASIC12.82□□□□□ -0.36
SSSCA1O60232 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SSSCA1O60232 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SSSCA1O60232 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SSSCA1O60232 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SSSCA1O60232 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SSSCA1O60232 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SSSCA1O60232 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SSSCA1O60232 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSSCA1O60232 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSSCA1O60232 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSSCA1O60232 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSSCA1O60232 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSSCA1O60232 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSSCA1O60232 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SSSCA1O60232 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
SSSCA1O60232 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.81□□□□□ -0.36
SSSCA1O60232 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms