Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXN3O00409 MIR943-201ENST00000401286 94 ntBASIC16.74■□□□□ 0.27
FOXN3O00409 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXN3O00409 TOMM22P5-201ENST00000416399 439 ntBASIC16.74■□□□□ 0.27
FOXN3O00409 AC015922.1-201ENST00000421102 1152 ntBASIC16.74■□□□□ 0.27
FOXN3O00409 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXN3O00409 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXN3O00409 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXN3O00409 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXN3O00409 AC015910.1-201ENST00000579400 975 ntBASIC16.74■□□□□ 0.27
FOXN3O00409 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXN3O00409 AC074044.1-201ENST00000609673 707 ntBASIC16.74■□□□□ 0.27
FOXN3O00409 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
FOXN3O00409 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
FOXN3O00409 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
FOXN3O00409 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXN3O00409 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXN3O00409 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXN3O00409 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FOXN3O00409 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXN3O00409 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
FOXN3O00409 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 TSSK5P-201ENST00000423978 907 ntBASIC16.73■□□□□ 0.27
FOXN3O00409 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
FOXN3O00409 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
FOXN3O00409 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.73■□□□□ 0.27
FOXN3O00409 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
FOXN3O00409 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.73■□□□□ 0.27
FOXN3O00409 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXN3O00409 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXN3O00409 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXN3O00409 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXN3O00409 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.73■□□□□ 0.27
FOXN3O00409 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
FOXN3O00409 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXN3O00409 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXN3O00409 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXN3O00409 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXN3O00409 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 LINC00528-201ENST00000600723 2160 ntBASIC16.72■□□□□ 0.27
FOXN3O00409 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
FOXN3O00409 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXN3O00409 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.72■□□□□ 0.27
FOXN3O00409 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.72■□□□□ 0.27
FOXN3O00409 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.72■□□□□ 0.27
FOXN3O00409 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.72■□□□□ 0.27
FOXN3O00409 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.72■□□□□ 0.27
FOXN3O00409 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.72■□□□□ 0.27
FOXN3O00409 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.72■□□□□ 0.27
FOXN3O00409 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXN3O00409 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
FOXN3O00409 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXN3O00409 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXN3O00409 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms