Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 BX088651.1-201ENST00000540551 451 ntBASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AD001527.2-201ENST00000622994 785 ntBASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC116562.4-202ENST00000641738 218 ntBASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC015802.1-201ENST00000588104 1449 ntBASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 KRT8P49-201ENST00000604166 1432 ntBASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.69□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AP003041.3-201ENST00000527151 707 ntBASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AL355075.4-201ENST00000554988 638 ntBASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AL353719.1-201ENST00000566847 864 ntBASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC024563.2-201ENST00000603282 481 ntBASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AL023803.3-201ENST00000615559 522 ntBASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GPAA1P2-202ENST00000606848 1787 ntBASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms