Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 AC104581.4-201ENST00000623126 3052 ntBASIC16.64■□□□□ 0.25
RCCD1A6NED2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 LINC01230-201ENST00000625222 3017 ntBASIC16.64■□□□□ 0.25
RCCD1A6NED2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCCD1A6NED2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RCCD1A6NED2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 AC041040.2-201ENST00000622926 2899 ntBASIC16.63■□□□□ 0.25
RCCD1A6NED2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 GRK6P1-201ENST00000400595 1711 ntBASIC16.63■□□□□ 0.25
RCCD1A6NED2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 RPL5P21-201ENST00000404620 815 ntBASIC16.63■□□□□ 0.25
RCCD1A6NED2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 FDX1P1-201ENST00000449115 551 ntBASIC16.63■□□□□ 0.25
RCCD1A6NED2 TIMM8BP1-201ENST00000452384 211 ntBASIC16.63■□□□□ 0.25
RCCD1A6NED2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 UXT-AS1-201ENST00000590504 1525 ntBASIC16.63■□□□□ 0.25
RCCD1A6NED2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 AC018529.2-202ENST00000611482 3087 ntBASIC16.63■□□□□ 0.25
RCCD1A6NED2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.63■□□□□ 0.25
RCCD1A6NED2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCCD1A6NED2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.62■□□□□ 0.25
RCCD1A6NED2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 TARDBPP1-201ENST00000442013 1203 ntBASIC16.62■□□□□ 0.25
RCCD1A6NED2 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 AC091917.2-201ENST00000505002 744 ntBASIC16.62■□□□□ 0.25
RCCD1A6NED2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 IGHV3-62-201ENST00000520057 340 ntBASIC16.62■□□□□ 0.25
RCCD1A6NED2 ADAM3B-201ENST00000569937 840 ntBASIC16.62■□□□□ 0.25
RCCD1A6NED2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms