Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 RPSAP31-201ENST00000416648 895 ntBASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AL391280.1-201ENST00000506969 1062 ntBASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AC116345.2-201ENST00000512837 523 ntBASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 BNIP3P13-201ENST00000599968 566 ntBASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AC103691.2-201ENST00000618824 433 ntBASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AC009084.3-201ENST00000623356 437 ntBASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCH2Q9Y6C5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 AC026316.1-201ENST00000398900 414 ntBASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 CHMP1AP1-201ENST00000445563 662 ntBASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 AC104073.2-201ENST00000453737 312 ntBASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 AC004923.1-202ENST00000642106 209 ntBASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCH2Q9Y6C5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms