Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 GGT3P-204ENST00000453783 1664 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 AC144831.1-201ENST00000573312 2656 ntBASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA9Q9Y5G4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 AL691432.1-201ENST00000596308 1422 ntBASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 ACTBP11-201ENST00000436287 1126 ntBASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 MIR5189-201ENST00000577370 114 ntBASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 BRI3BPP1-201ENST00000594224 787 ntBASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA9Q9Y5G4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 CTBP2P5-201ENST00000454986 1264 ntBASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 POU5F1P6-201ENST00000466990 990 ntBASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 RPL13AP25-201ENST00000484130 612 ntBASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 PDIA3P1-201ENST00000471856 1510 ntBASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 KRT8P37-201ENST00000451609 1420 ntBASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDHGA9Q9Y5G4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms