Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 TSSK5P-201ENST00000423978 907 ntBASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 BASP1P1-201ENST00000430708 665 ntBASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 CT45A11P-201ENST00000448043 1134 ntBASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 CYMP-203ENST00000474680 1263 ntBASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 AC092337.1-201ENST00000568699 1129 ntBASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB13Q9Y5F0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 MTND2P3-201ENST00000452458 470 ntBASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 AL512638.1-201ENST00000457493 794 ntBASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 AL390955.2-201ENST00000603032 514 ntBASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 AC074044.1-201ENST00000609673 707 ntBASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 AL109924.4-201ENST00000623089 670 ntBASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB13Q9Y5F0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHB13Q9Y5F0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHB13Q9Y5F0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHB13Q9Y5F0 AC020658.6-201ENST00000623564 1870 ntBASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms