Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 AC134407.2-201ENST00000625089 1978 ntBASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 TUBB3P1-201ENST00000405796 1332 ntBASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 FO393414.2-201ENST00000405153 598 ntBASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 Z92544.3-201ENST00000624747 417 ntBASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 KRT8P37-201ENST00000451609 1420 ntBASIC14.41□□□□□ -0.1
TRAPPC4Q9Y296 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAPPC4Q9Y296 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.11
TRAPPC4Q9Y296 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRAPPC4Q9Y296 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms