Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 GRK6P1-201ENST00000400595 1711 ntBASIC14.03□□□□□ -0.16
COPS3Q9UNS2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 LINC01101-201ENST00000622953 1884 ntBASIC14.03□□□□□ -0.16
COPS3Q9UNS2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
COPS3Q9UNS2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.02□□□□□ -0.17
COPS3Q9UNS2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.02□□□□□ -0.17
COPS3Q9UNS2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.02□□□□□ -0.17
COPS3Q9UNS2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 EEF1DP4-201ENST00000446006 880 ntBASIC14.01□□□□□ -0.17
COPS3Q9UNS2 PHKG1P2-201ENST00000457537 863 ntBASIC14.01□□□□□ -0.17
COPS3Q9UNS2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 SLC25A1P1-201ENST00000528351 927 ntBASIC14.01□□□□□ -0.17
COPS3Q9UNS2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 HNRNPUP1-201ENST00000554987 333 ntBASIC14.01□□□□□ -0.17
COPS3Q9UNS2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 AC097359.3-201ENST00000603982 1210 ntBASIC14.01□□□□□ -0.17
COPS3Q9UNS2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
COPS3Q9UNS2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms