Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 SPDYE17-201ENST00000412399 783 ntBASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 RBPMS2P1-201ENST00000437762 623 ntBASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 AC093520.2-201ENST00000561830 333 ntBASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 MIR4469-201ENST00000583919 79 ntBASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LRTM1Q9HBL6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 CICP24-201ENST00000605464 2705 ntBASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRTM1Q9HBL6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 HIST3H2BA-201ENST00000436555 524 ntBASIC15.08■□□□□ 0
LRTM1Q9HBL6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 YBX1P5-201ENST00000509441 847 ntBASIC15.08■□□□□ 0
LRTM1Q9HBL6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.08■□□□□ 0
LRTM1Q9HBL6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRTM1Q9HBL6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRTM1Q9HBL6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms