Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 TUBB3P1-201ENST00000405796 1332 ntBASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 MIR943-201ENST00000401286 94 ntBASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 GPS2P2-201ENST00000430745 888 ntBASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 INGX-202ENST00000489074 768 ntBASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 RNA5SP421-201ENST00000516864 134 ntBASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FOXP3Q9BZS1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXP3Q9BZS1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXP3Q9BZS1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
FOXP3Q9BZS1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXP3Q9BZS1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 EEF1DP4-201ENST00000446006 880 ntBASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FOXP3Q9BZS1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 ZBED1P1-201ENST00000502364 1930 ntBASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 KLF2P3-201ENST00000451977 1087 ntBASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 PHKG1P2-201ENST00000457537 863 ntBASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AC125807.1-201ENST00000483097 614 ntBASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms