Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ACTG1P14-201ENST00000446382 1122 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 TIMM8BP1-201ENST00000452384 211 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 SLC25A1P1-201ENST00000528351 927 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC084121.4-201ENST00000641598 221 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 AF228730.8-201ENST00000642140 221 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 UXT-AS1-201ENST00000590504 1525 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 LINC00528-201ENST00000600723 2160 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 FGD5P1-202ENST00000614866 2498 ntBASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SHANK2-AS3Q9BTD1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SHANK2-AS3Q9BTD1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SHANK2-AS3Q9BTD1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.08□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
SHANK2-AS3Q9BTD1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SHANK2-AS3Q9BTD1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 YBX2P1-201ENST00000394192 760 ntBASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC023274.1-201ENST00000418278 595 ntBASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 SLC25A39P2-201ENST00000537614 270 ntBASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 RARRES2P9-201ENST00000565168 469 ntBASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC120114.3-201ENST00000611923 658 ntBASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 AL390755.1-201ENST00000623716 2027 ntBASIC12.08□□□□□ -0.48
SHANK2-AS3Q9BTD1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms