Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SMOQ99835 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.31■□□□□ 0.2
SMOQ99835 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMOQ99835 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.31■□□□□ 0.2
SMOQ99835 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SMOQ99835 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.31■□□□□ 0.2
SMOQ99835 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
SMOQ99835 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMOQ99835 RPL5P21-201ENST00000404620 815 ntBASIC16.31■□□□□ 0.2
SMOQ99835 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.31■□□□□ 0.2
SMOQ99835 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.31■□□□□ 0.2
SMOQ99835 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.31■□□□□ 0.2
SMOQ99835 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.31■□□□□ 0.2
SMOQ99835 AC008735.3-201ENST00000596646 500 ntBASIC16.31■□□□□ 0.2
SMOQ99835 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.31■□□□□ 0.2
SMOQ99835 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMOQ99835 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SMOQ99835 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SMOQ99835 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.31■□□□□ 0.2
SMOQ99835 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 AC087481.3-201ENST00000602886 1894 ntBASIC16.31■□□□□ 0.2
SMOQ99835 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.31■□□□□ 0.2
SMOQ99835 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SMOQ99835 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.3■□□□□ 0.2
SMOQ99835 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.3■□□□□ 0.2
SMOQ99835 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.3■□□□□ 0.2
SMOQ99835 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.3■□□□□ 0.2
SMOQ99835 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.3■□□□□ 0.2
SMOQ99835 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.3■□□□□ 0.2
SMOQ99835 USP32P1-208ENST00000506594 1164 ntBASIC16.3■□□□□ 0.2
SMOQ99835 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.3■□□□□ 0.2
SMOQ99835 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.3■□□□□ 0.2
SMOQ99835 AP001582.1-201ENST00000525856 295 ntBASIC16.3■□□□□ 0.2
SMOQ99835 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.3■□□□□ 0.2
SMOQ99835 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.3■□□□□ 0.2
SMOQ99835 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.3■□□□□ 0.2
SMOQ99835 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SMOQ99835 MSTO2P-201ENST00000314835 1709 ntBASIC16.3■□□□□ 0.2
SMOQ99835 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 SSR4P1-203ENST00000599569 2260 ntBASIC16.3■□□□□ 0.2
SMOQ99835 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMOQ99835 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.29■□□□□ 0.2
SMOQ99835 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMOQ99835 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMOQ99835 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.29■□□□□ 0.2
SMOQ99835 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms