Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 NFIC-211ENST00000641145 8399 ntBASIC10.42□□□□□ -0.74
LITAFQ99732 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 AC073439.1-201ENST00000624121 1774 ntBASIC10.42□□□□□ -0.74
LITAFQ99732 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC10.42□□□□□ -0.74
LITAFQ99732 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
LITAFQ99732 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC10.42□□□□□ -0.74
LITAFQ99732 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC10.42□□□□□ -0.74
LITAFQ99732 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.42□□□□□ -0.74
LITAFQ99732 AC074051.2-201ENST00000565115 352 ntBASIC10.42□□□□□ -0.74
LITAFQ99732 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC10.42□□□□□ -0.74
LITAFQ99732 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.42□□□□□ -0.74
LITAFQ99732 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 AL591122.2-201ENST00000624125 1853 ntBASIC10.42□□□□□ -0.74
LITAFQ99732 AC015818.8-201ENST00000587907 1519 ntBASIC10.42□□□□□ -0.74
LITAFQ99732 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 NUTM2HP-201ENST00000442076 2498 ntBASIC10.42□□□□□ -0.74
LITAFQ99732 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LITAFQ99732 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
LITAFQ99732 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC10.42□□□□□ -0.74
LITAFQ99732 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
LITAFQ99732 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC10.41□□□□□ -0.74
LITAFQ99732 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LITAFQ99732 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LITAFQ99732 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LITAFQ99732 GHSR-202ENST00000427970 912 ntBASIC10.41□□□□□ -0.74
LITAFQ99732 RPS15P9-201ENST00000494093 319 ntBASIC10.41□□□□□ -0.74
LITAFQ99732 AC063952.2-201ENST00000498792 1227 ntBASIC10.41□□□□□ -0.74
LITAFQ99732 NMU-205ENST00000511469 756 ntTSL 3 BASIC10.41□□□□□ -0.74
LITAFQ99732 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.41□□□□□ -0.74
LITAFQ99732 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
LITAFQ99732 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 FHL2-212ENST00000607522 759 ntTSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms