Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.07■□□□□ 0
UBE2E3Q969T4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.07■□□□□ 0
UBE2E3Q969T4 GPALPP1-207ENST00000611650 899 ntBASIC15.07■□□□□ 0
UBE2E3Q969T4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
UBE2E3Q969T4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.07■□□□□ 0
UBE2E3Q969T4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
UBE2E3Q969T4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 AC126365.1-201ENST00000578585 1514 ntBASIC15.07■□□□□ 0
UBE2E3Q969T4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBE2E3Q969T4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.07■□□□□ 0
UBE2E3Q969T4 AC097376.2-205ENST00000610159 5334 ntBASIC15.07■□□□□ 0
UBE2E3Q969T4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.07■□□□□ 0
UBE2E3Q969T4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.07■□□□□ 0
UBE2E3Q969T4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.06■□□□□ 0
UBE2E3Q969T4 AC007326.2-201ENST00000624224 7579 ntBASIC15.06■□□□□ 0
UBE2E3Q969T4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.06■□□□□ 0
UBE2E3Q969T4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
UBE2E3Q969T4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.06■□□□□ 0
UBE2E3Q969T4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.06■□□□□ 0
UBE2E3Q969T4 AC092580.3-201ENST00000430932 139 ntBASIC15.06■□□□□ 0
UBE2E3Q969T4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.06■□□□□ 0
UBE2E3Q969T4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.06■□□□□ 0
UBE2E3Q969T4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.06■□□□□ 0
UBE2E3Q969T4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.06■□□□□ 0
UBE2E3Q969T4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.06■□□□□ 0
UBE2E3Q969T4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
UBE2E3Q969T4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 AC100757.3-201ENST00000622361 1406 ntBASIC15.06■□□□□ 0
UBE2E3Q969T4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
UBE2E3Q969T4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBE2E3Q969T4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.05■□□□□ 0
UBE2E3Q969T4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.05■□□□□ 0
UBE2E3Q969T4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
UBE2E3Q969T4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
UBE2E3Q969T4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBE2E3Q969T4 AC023157.3-201ENST00000619086 2088 ntBASIC15.05■□□□□ 0
UBE2E3Q969T4 AL109954.1-202ENST00000564051 2148 ntBASIC15.05■□□□□ 0
UBE2E3Q969T4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
UBE2E3Q969T4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.05■□□□□ 0
UBE2E3Q969T4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.05■□□□□ 0
UBE2E3Q969T4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBE2E3Q969T4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBE2E3Q969T4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
UBE2E3Q969T4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
UBE2E3Q969T4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBE2E3Q969T4 AL139384.1-201ENST00000612143 3047 ntBASIC15.05■□□□□ 0
UBE2E3Q969T4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.05■□□□□ -0
UBE2E3Q969T4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBE2E3Q969T4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
UBE2E3Q969T4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.05■□□□□ -0
UBE2E3Q969T4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.05■□□□□ -0
UBE2E3Q969T4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
UBE2E3Q969T4 TOMM22P5-201ENST00000416399 439 ntBASIC15.05■□□□□ -0
UBE2E3Q969T4 AC074338.1-201ENST00000416825 156 ntBASIC15.05■□□□□ -0
UBE2E3Q969T4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
UBE2E3Q969T4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.05■□□□□ -0
UBE2E3Q969T4 RPL13P2-201ENST00000440687 659 ntBASIC15.05■□□□□ -0
UBE2E3Q969T4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.05■□□□□ -0
UBE2E3Q969T4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms