Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.64■□□□□ 0.25
DDX1Q92499 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.64■□□□□ 0.25
DDX1Q92499 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.64■□□□□ 0.25
DDX1Q92499 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DDX1Q92499 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
DDX1Q92499 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.63■□□□□ 0.25
DDX1Q92499 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DDX1Q92499 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
DDX1Q92499 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 RPL5P21-201ENST00000404620 815 ntBASIC16.63■□□□□ 0.25
DDX1Q92499 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.63■□□□□ 0.25
DDX1Q92499 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.63■□□□□ 0.25
DDX1Q92499 AC009407.1-201ENST00000568958 598 ntBASIC16.63■□□□□ 0.25
DDX1Q92499 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
DDX1Q92499 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.63■□□□□ 0.25
DDX1Q92499 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DDX1Q92499 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.63■□□□□ 0.25
DDX1Q92499 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
DDX1Q92499 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DDX1Q92499 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.62■□□□□ 0.25
DDX1Q92499 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DDX1Q92499 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DDX1Q92499 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DDX1Q92499 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DDX1Q92499 CROCCP1-201ENST00000426910 5675 ntBASIC16.62■□□□□ 0.25
DDX1Q92499 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.62■□□□□ 0.25
DDX1Q92499 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
DDX1Q92499 AL133267.1-201ENST00000398220 340 ntBASIC16.62■□□□□ 0.25
DDX1Q92499 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.62■□□□□ 0.25
DDX1Q92499 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.62■□□□□ 0.25
DDX1Q92499 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.62■□□□□ 0.25
DDX1Q92499 GIMAP3P-201ENST00000495150 836 ntBASIC16.62■□□□□ 0.25
DDX1Q92499 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.62■□□□□ 0.25
DDX1Q92499 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.62■□□□□ 0.25
DDX1Q92499 HILS1-202ENST00000545329 423 ntBASIC16.62■□□□□ 0.25
DDX1Q92499 TP53TG3HP-202ENST00000569755 579 ntBASIC16.62■□□□□ 0.25
DDX1Q92499 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.62■□□□□ 0.25
DDX1Q92499 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
DDX1Q92499 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms