Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 IGHV3-62-201ENST00000520057 340 ntBASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 AC027601.4-201ENST00000611259 610 ntBASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 FAM197Y3-203ENST00000618346 717 ntBASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC44A1Q8WWI5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
SLC44A1Q8WWI5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC44A1Q8WWI5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SLC44A1Q8WWI5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.71■□□□□ 0.1
SLC44A1Q8WWI5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
SLC44A1Q8WWI5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC44A1Q8WWI5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 MED15P5-201ENST00000423150 992 ntBASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 SLC25A39P2-201ENST00000537614 270 ntBASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 RARRES2P9-201ENST00000565168 469 ntBASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 NFIC-211ENST00000641145 8399 ntBASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
SLC44A1Q8WWI5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 REXO1L2P-201ENST00000425429 2069 ntBASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 GRK6P1-201ENST00000400595 1711 ntBASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC44A1Q8WWI5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms